Repeated bouts of acute pyelonephritis may lead to chronic pyelonephritis. Complications of chronic pyelonephritis include chronic kidney disease (from progressive loss of nephrons secondary to chronic inflammation and scarring), hypertension, and formation of kidney stones (from chronic infection with urea-splitting organisms).
Long-term use of prophylactic antimicrobial therapy to eradicate bacteria in the urine may help limit recurrence of infections and renal scarring. Impaired renal function alters the excretion of antimicrobial agents and necessitates careful monitoring of renal function, especially if the medications are potentially toxic to the kidneys.
For more information, see Chapter 55 in Hinkle, J. L., & Cheever, K. H. (2018). Brunner and Suddarth's textbook of medical-surgical nursing (14th ed.). Philadelphia, PA: Lippincott Williams & Wilkins.